Items where Author is "Caporaso, Greg"

Article

Schwarzberg, Karen and Le, Rosalin and Bharti, Balambal and Lindsay, Suzanne and Casaburi, Giorgio and Salvatore, Francesco and Saber, Mohamed H. and Alonaizan, Faisal and Slots, Jørgen and Gottlieb, Roberta A. and Caporaso, J. Gregory and Kelley, Scott T. (2014) The personal human oral microbiome obscures the effects of treatment on periodontal disease. PLoS ONE, 9 (1). e86708. ISSN 1932-6203

Shade, Ashley and Jones, Stuart E. and Caporaso, J. Gregory and Handelsman, Jo and Knight, Rob and Fierer, Noah and Gilbert, Jack A. (2014) Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity. mBio, 5 (4). ISSN 2150-7511

Field, D. and Sterk, P. and Kottmann, R. and De Smet, J.W. and Amaral-Zettler, L. and Cochrane, G. and Cole, J.R. and Davies, N. and Dawyndt, P. and Garrity, G.M. and Gilbert, J.A. and Glöckner, F.O and Hirschman, L. and Klenk, H.P. and Knight, R. and Kyrpides, N. and Meyer, F. and Karsch-Mizrachi, I. and Morrison, N. and Robbins, R. and San Gil, I. and Sansone, S. and Schriml, L. and Tatusova, T. and Ussery, D. and Yilmaz, P. and White, O. and Wooley, J. and Caporaso, G. (2014) Genomic standards consortium projects. Standards in genomic sciences, 9. pp. 599-601. ISSN 1944-3277

Rideout, Jai Ram and He, Yan and Navas-Molina, Jose A. and Walters, William A. and Ursell, Luke K. and Gibbons, Sean M. and Chase, John and McDonald, Daniel and Gonzalez, Antonio and Robbins-Pianka, Adam and Clemente, Jose C. and Gilbert, Jack A. and Huse, Susan M. and Zhou, Hong-Wei and Knight, Rob and Caporaso, J. Gregory (2014) Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences. PeerJ, 2 (e545). ISSN 2167-8359

Flores, Gilberto E. and Caporaso, J. Gregory and Henley, Jessica B. and Rideout, Jai Ram and Domogala, Daniel David and Chase, John and Leff, Jonathan W. and Vazquez-Baeza, Yoshiki and Gonzalez, Antonio and Knight, Rob and Dunn, Robert R. and Fierer, Noah (2014) Temporal variability is a personalized feature of the human microbiome. Genome Biology, 15 (12). p. 531. ISSN 1465-6914

Sahl, Jason W. and Caporaso, J. Gregory and Rasko, David A. and Keim, Paul (2014) The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes. PeerJ, 2 (e332). ISSN 2167-8359

Michelou, Vanessa K. and Caporaso, J. Gregory and Knight, Rob and Palumbi, Stephen R. (2013) The ecology of microbial communities associated with Macrocystis pyrifera. PLoS ONE, 8 (6). e67480. ISSN 1932-6203

Hewitt, Krissi M. and Mannino, Frank L. and Gonzalez, Antonio and Chase, John H. and Caporaso, J. Gregory and Knight, Rob and Kelley, Scott T. (2013) Bacterial diversity in two neonatal intensive care units (NICUs). PLoS ONE, 8 (1). pp. 1-7. ISSN 1932-6203

Roy, A.-S. and Gibbons, S. M. and Schunck, H. and Owens, S. and Caporaso, J. G. and Sperling, M. and Nissimov, J. I. and Romac, S. and Bittner, L. and Riebesell, U. and LaRoche, J. and Gilbert, J. A. (2013) Ocean acidification shows negligible impacts on high-latitude bacterial community structure in coastal pelagic mesocosms. Biogeosciences, 10 (1). pp. 555-566. ISSN 1726-4189

McDonald, Daniel and Clemente, Jose C. and Kuczynski, Justin and Rideout, Jai Ram and Stombaugh, Jesse and Wendel, Doug and Wilke, Andreas and Huse, Susan and Hufnagle, John and Meyer, Folker and Knight, Rob and Caporaso, J. Gregory (2012) The biological observation matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome. GigaScience, 1 (1). p. 7. ISSN 2047-217X

Caporaso, J. Gregory and Knight, Rob and Kelley, Scott T. (2011) Host-associated and free-living phage communities differ profoundly in phylogenetic composition. PLoS ONE, 6 (2). e16900. ISSN 1932-6203

Bates, Scott T. and Cropsey, Garrett W. G. and Caporaso, J. Gregory and Knight, Rob and Fierer, Noah (2011) Bacterial communities associated with the lichen symbiosis. Applied and Environmental Microbiology, 77 (4). pp. 1309-1314. ISSN 1098-5336